Cancer Imaging Phenomics Toolkit (CaPTk)  1.7.0
Changelog: Release Notes

New Applications and Tools

  1. Perfusion Alignment
  2. Deep Learning Inference Engine based on DeepMedic
  3. Native DICOM ingestion
  4. Preprocessing and Utilities added to create pipelines
  5. Spherical drawing

Updates

  1. New Feature Families and image resampling added to Feature Extraction Panel
  2. Packaging improvements for macOS and Linux
  3. Updated "--help" for CLI applications
  4. CI/CD integration
  5. Comparison mode view
  6. Training Module improvements
  7. Annotation visualization improvements (single/multiple label view)

Known Issues

https://github.com/CBICA/CaPTk/issues

Older Versions

1.6.1

  • Generic bug fixes in several applications
  • Feature Extraction fixes on par with IBSI
  • OpenGL rendering added to better handle scaling issues
  • New "Preprocessing" executable added which has a bunch of generic functionality

1.6.0

  • New applications have been added: Lung Cancer Segmentation/Analysis, Pseudo-Progression, EGFRvIII-SVM, Training Module, DeepMedic Segmentation, Greedy Registration
  • Updates to Feature Extraction Panel (Lattice-based computation, new feature families)
  • macOS package has been added
  • Lots of bug-fixes and improvements

1.5.0

  • New applications added: Perfusion derivatives (ap-rCBV, PSR, PH), Diffusion derivatives (FA, AX, RAD, TR), PCA Volume Extraction, GBM Molecular Subtype Prediction, GBM Population Atlas
  • Performance and UI improvements
  • New user-centric documentation & intro, based on NIH/ITCR guidelines
  • DICOM to NIfTI conversion
  • Complete integration of WhiteStripe in the CaPTk UI (batch via CLI)
  • Updated implementation of Directionality Estimation

1.3.0

  • Labels updated to support GLISTR and GLISTRboost outputs
  • Added a way to invoke CaPTk from the command line to make QC of multiple subjects easier
  • Double click to add tissue points and tumor point centers
  • New applications added
  • Performance and UI improvements

1.2.0

  • New applications added
  • Interactive functionality updated
  • Added central core for statistical analyses
  • Bug fixes

1.1.0

  • Added functionality to drawing
  • Documentation updated with more illustrative screenshots

1.0.1

  • Updated documentation outside and inside the application
  • Random bug-fixes

2017.02.01

  • First public release of CaPTk_Full (version 1.0.0)
  • Applications populated using highlighted algorithms from CBICA
  • Feature Panel added to generate a comprehensive radiomic feature set for training
  • More optimizations and bug-fixes in interaction

2016.10.14

  • Release for MICCAI 2016
  • UI optimizations
  • Seed point selector updated

2016.09.05

  • Move to a date-based versioning system for more clarity and coherence
  • SeedSelector version for GLISTR, GLISTRboost, PORTR added to compilation
  • Major UI overhaul with more dynamic elements

0.0.2

  • Bug fixes in the seed points are saved
  • Generic interactive improvements

0.0.1

  • First (internal) release of CaPTk
  • Mostly a prototype at this stage
  • Interactive elements (seed-point initialization, ROI drawing) work properly
  • Image loading for NIfTI and DICOM works
  • Some applications have been added to the compilation for testing

Contact software@cbica.upenn.edu for questions, etc.

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