waltlabtools.read_quanterix module¶
Functions for reading in data from Quanterix instruments.
This module provides tools for interacting with a Quanterix Simoa HD-X Analyzer.
In addition to the dependencies for waltlabtools, waltlabtools.read_quanterix also requires pandas >= 0.25.
- run_history(filepath=None, drop_cols='blank') pandas.core.frame.DataFrame [source]¶
Reads in a Quanterix HD-X Run History file.
- Parameters
filepath (str, path object or file-like object, optional) -- The path to the Run History CSV file. Any valid string path is acceptable. The string could be a URL. Valid URL schemes include http, ftp, s3, gs, and file. Can also be any os.PathLike or any object with a read() method. If not provided, a tkinter.filedialog opens, prompting the user to select a file.
drop_cols ({"blank", "uniform", "keep"}, default "blank") --
- Should any columns be dropped? Options:
"blank" : Drop all columns that are blank.
"uninformative" : Drop all columns that have the same value for all rows, which includes all blank columns.
"keep" : Do not drop any columns.
- Returns
table (pandas.DataFrame) -- Run History.